Are we not supposed to use the (NTSC)5 Star Edition?

[Cornjob]

Okay, I jumped the gun. 

The second half is pretty close.  It's dead on at the middle and a fraction of a second off toward the end.  But then I noticed some of the earlier ones are still off.  I don't have time to mess with it now, so I'll investigate further later.

[Cornjob]

Okay, fine.  I don't really get what was going on, but I've got it now.  Extracting the audio from the theatrical version wasn't working until I ripped ONLY the theatrical version in reauthor mode.  Then it worked.  Considering the audio I was getting was still the same length and not 9 minutes longer, I don't understand why it was off in parts.

But oh well.  I gots it now, and I's gonna have me a happy-ass weekend.  Yay.

[deadking13]

Hmm.  What's the length supposed to be in total?  I'm trying to use the "theatrical version" from the 5-Star Edition, but it's just not quite right.  It's 2:24:46 in length, but the DA sync lines don't match up after the third time. 

SAMPLES:
That game couldn't have been pretty  6:09 -> 6:09 (+0s)
But the infrared is totally off the map  14:13 -> 14:29 (+ 16s)
Pentagon officials have retrofit...  38:48 -> 39:22 (+ 34s)
Release...me... 1:22:23 -> 1:23:17 (+54s)
How bout our two delivery boys? 2:13:34 -> 2:14:28 (+ 54s)

It's almost as if there are extra scenes, albeit short ones, totaling 54 seconds.  It's weird.  Anyone else having this problem?

I am having this exact same problem.  This has been the most pain-in-the-ass project of all the ones I've done thus far (including Transformers 2).  The DVD I owned had a scratch on it that made it impossible to rip, so I had to go and buy a whole new DVD (the wal-mart "limited edition") and I used DVDfab to rip the theatrical version to an ISO, mounted that and used rejig to demux.  The sample cornjob posted is the same as mine, towards the end its off by about fifty-six seconds.  It's fine through the first half hour, but after that it gets consistently out of sync.  It's become extremely frustrating and my frustration is only fueling my resolve to get this damn thing done.